محمد فواد اباذری
اینجانب در سال ۸۹ علی رغم قبولی پزشکی دانشگاه علوم پزشکی شاهرود، لیسانس خود را در دانشگاه آزاد تهران با رتبه ۱ در رشته ژنتیک آغاز کردم و پس از ۲ سال و ۸ ماه با معدل ۱۹.۰۱ با رتبه ۱ فارغ التحصیل شدم. پس از آن با فاند ۲۵ هزار دلاری، راهی دانشگاه METU (رنک ۸۵) در ترکیه شدم و تز ارشد خود را در ژنتیک باستان شناسی به پایان رساندم. سپس افتخار همکاری با مرکز تحقیقات را کسب کردم که ثمره ی آن ثبت یک اختراع (داروی MS) در کشور آمریکا (Pub No.:US-2019-0092832-A1)، تالیف چند عنوان کتاب به زبان فارسی و انگلیسی (Elsevier Publication) و چاپ ۴۰ عنوان مقاله در ژورنال های معتبر دنیا بوده است. عمده ی فعالیت هایم در تولید بافت های بدن از جمله سلول های قلبی (Cardiomyocyte)، سلول های استخوان ساز، غضروف، دندان و بیش از همه سلول های تولید کننده انسولین برای بیماران دیابتی با استفاده از سلول های بنیادین القایی (iPSCs)، روی داربست های مختلف متمرکز بوده است. همکاری اینجانب با مرکز تحقیقات اما، به موضوعات بالا محدود نبوده است، بطوری که در طی دو سال اخیر به عنوان سرپرست بخش آنالیز بیوانفورماتیک مرکز، از محضر اساتید گرانقدر بهره برده ام.
Personal Details
First Name: Mohammad Foad
Last Name: Abazari
Birth Information: 01/July/1991, Tehran, Iran
Skype Name: Foad Abazari
E-mail: Foadabazari@outlook.com
Education
Bachelor of Science
Cellular and Molecular Biology, Department of Genetics, Islamic Azad University, Tehran, Iran, Sep 2010- Jun2013 (GPA: 3.8/4.0)
M.Sc. Degree
Genetics, Department of Genetics, Islamic Azad University, Tehran Medical Branch, Tehran, Iran, Feb 2014- May 2017 (Master Courses/Thesis) (GPA: 3.7/4.0)
Department of Biological Sciences, Middle East Technical University, 06800 Ankara, Turkey (Master Thesis) Feb 2017- Jan 2018
Techniques
Cell Culture - PCR and qPCR - Immunohistochemistry
Animal Modeling - Western Blotting - Drug Design
Biochemical Techniques - Gene Cloning - Protein Expression
Computer
- Selected Bioinformatic and NGS Software:
GenePattern, Galaxy suit, ARACNE, Avadis NGS, GeneSpring GX, Bowtie, Tophat, Cufflinks, HISAT2, CummRbound, BWA, GATK, VarScan, Samtools for SNP discovery, Picard, Trimomatic, FastX, FastQC, Velvet assembler, Trinity assembler, RSEM, HTSeq, SOAP aligner, SOAPdenovo, DESeq,DESeq2,EdgeR, NCBI Blast toolkit, Cytoscape 3, Bingo, Mev 4 , IPA Ingenuity, Gbrowse2 (GMOD), JBrowse, Galaxy NGS Suit, RNAWorkbench (miRanalyzer2), mirDeep, David functional, Reactom ,enrichR, Blast2Go, mirTarBase, TargetScan, PicTar and etc.
R and R sudio Skills:
Gene expression: Totally familiar with working with Gene expression data unnormalized (and normalized result) both Microarray and RNA-SEQ packages such as limma, lumi, affy, DESeq, DESeq2, EdgeR, DEGSeq, GAGE, WGCNA, GEOquery and etc.
Visualization: working with basic plot functions (bar plot, box plot, pie chart , violin plot, volcano plot, scatter plot, PCA , … ) and also packages like gplots, ggplot2, Pheatmap, CummRbound and etc.
Statistics: Working with statistical test in R such as basic functions t-test, f-test, anova, variance discovery, FDR and multiple tests, normalization methods, clustering methods and etc.
Honors
- (2019) Winner of Ebne Sina Student Award
- Publishing more than 40 scientific papers (average Impact factor: 4.2)
- (2017) $25,000 scholarship in METU University
- (2010) Ranked first in the Azad University B.Sc. entrance exam
- (2013) Finishing B.Sc. in 2 years and eight months (a 4-year program) with the first rank, and obtaining GPA of 3.8/4.0
- (2008) Winner of gold medal in National Student Swimming Championship 200m and 400m freestyle- Tehran
- Judo Black Belt (Dan 2)
Books
- Hormones and Stem Cells, Chapter 7, Generation of high yield insulin-producing cells (IPCs) from various sources of stem cells, Vitamin and Hormones, Elsevier publication group,2021, DOI: 10.1016/bs.vh.2021.006
- Nanobiosensor, Heydarzadeh S, Abazari MF, Hassanvand S, 2019, ISBN: 978-600-995-997-6
- Microenvironment and Cancer Genetics, Poortahmasebi V, Poorebrahim M, Mostafavi S, Akbari M, Abazari D, Abazari MF. 2016, ISBN: 978-600-293-245-7
Selective Publications (5 out of 40)
- Mansour Poorebrahim*, Mohammad Foad Abazari, Solmaz Sadeghi, Reza Mahmoudi, Asma Kheirollahi, Hassan Askari , Stina L. Wickström, Vahdat Poortahmasebi, Andreas Lundqvist, Rolf Kiessling, Angel Cid-Arregui. Genetically modified immune cells targeting tumor antigens. Pharmacology & Therapeutics. 2020 (impact factor: 10.55)
- Abazari MF, Soleimanfar M, Enderami E, Nasiri N, Nejati F, Mousavi A, Kehtari M, Ghoraeian P, Decellularized amniotic membrane Scaffolds improve differentiation of iPSCs to functional hepatocyte-like cells. Journal of Cellular Biochemistry. 2019 (impact factor: 4.23)
- Abazari MF, Soleimanfar M, Amini Faskhodi M, Nasiri R, Mousavi A, Sadeghi S, Hassannia H, Sabouri E, Enderami E, Zarekarizi S; Improved osteogenic differentiation of the human induced pluripotent stem cells cultured on Polyvinylidene fluoride/Collagen/Platelet-Rich Plasma composite nanofibers. Journal of Cellular Physiology. 2019 (impact factor: 5.56)
- Abazari MF, Nasiri R, Nejati F, Zarekarizi S, Amini Faskhodi M, Sabouri E, Aghapur N, Mahdavi MR, Ardeshirylajimi, Enderami E, Soleimanfar F; Comparison of human-induced pluripotent stem cells and mesenchymal stem cell differentiation potential to insulin producing cells in 2D and 3D culture systems in vitro. Journal of Cellular Physiology. 2019 (impact factor: 5.56)
- Jayman M, Davatgaran Taghipour Y, Rezaei A, Derakhshankhah H, Abazari MF, Samadian H, Hambin M; Radiolabeled carbon-based nanostructures: New radiopharmaceuticals for cancer therapy? ,Coordination Chemistry Reviews. 2021, https://doi.org/10.1016/j.ccr.2021.213974 (impact factor: 15.36)
Dr. Shahin Ranjbar
Program in Cellular and Molecular Medicine, Children’s Hospital Boston, Harvard Medical School, Boston, USA
Shahin.ranjbar@children.harvard.edu
Dr. Shohreh Zare
Head of department of Genetics, Varamin-Pishva branch, Azad University, Tehran, Iran
zare@iauvaramin.ac.ir
Dr. Mansoor Poorebrahim
Post Doc fellowship in DKFZ, Heidelberg, Germany
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